Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 CNN2P6-201ENST00000439038 900 ntBASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGA7Q9Y5G6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA7Q9Y5G6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA7Q9Y5G6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA7Q9Y5G6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHGA7Q9Y5G6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA7Q9Y5G6 AC010141.2-201ENST00000452426 721 ntBASIC20.4■□□□□ 0.86
PCDHGA7Q9Y5G6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
PCDHGA7Q9Y5G6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA7Q9Y5G6 AC079089.2-201ENST00000531211 1277 ntBASIC20.4■□□□□ 0.86
PCDHGA7Q9Y5G6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA7Q9Y5G6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PCDHGA7Q9Y5G6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA7Q9Y5G6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA7Q9Y5G6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PCDHGA7Q9Y5G6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA7Q9Y5G6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 FAM201B-201ENST00000458407 597 ntBASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 AC138907.5-202ENST00000569484 235 ntBASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 AC010536.3-201ENST00000620306 533 ntBASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGA7Q9Y5G6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 AC105036.2-201ENST00000569468 176 ntBASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHGA7Q9Y5G6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 MIR4651-201ENST00000582622 73 ntBASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA7Q9Y5G6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 SLC7A5P1-201ENST00000568957 537 ntBASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHGA7Q9Y5G6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA7Q9Y5G6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
PCDHGA7Q9Y5G6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA7Q9Y5G6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHGA7Q9Y5G6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA7Q9Y5G6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA7Q9Y5G6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA7Q9Y5G6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA7Q9Y5G6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms