Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 AC027702.1-201ENST00000563810 1770 ntBASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
LSM4Q9Y4Z0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 AC007952.6-201ENST00000573168 2673 ntBASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 AC003957.1-201ENST00000625108 2673 ntBASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.46■□□□□ 0.23
LSM4Q9Y4Z0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LSM4Q9Y4Z0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LSM4Q9Y4Z0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
LSM4Q9Y4Z0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
LSM4Q9Y4Z0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 AC121338.2-201ENST00000622535 1744 ntBASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 AC105233.4-201ENST00000642045 216 ntBASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.45■□□□□ 0.22
LSM4Q9Y4Z0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 AC020907.5-201ENST00000624372 1936 ntBASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSM4Q9Y4Z0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSM4Q9Y4Z0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LSM4Q9Y4Z0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSM4Q9Y4Z0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSM4Q9Y4Z0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSM4Q9Y4Z0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSM4Q9Y4Z0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSM4Q9Y4Z0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSM4Q9Y4Z0 AC007225.1-201ENST00000566331 1836 ntBASIC16.43■□□□□ 0.22
LSM4Q9Y4Z0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms