Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAF6Q9Y4K3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRAF6Q9Y4K3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 MIR939-201ENST00000401314 82 ntBASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAF6Q9Y4K3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 AF213884.3-201ENST00000563833 479 ntBASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 AFG3L1P-217ENST00000557444 2447 ntBASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAF6Q9Y4K3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 AC091305.1-201ENST00000479476 895 ntBASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF6Q9Y4K3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 AL136967.2-201ENST00000623968 743 ntBASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 AC112907.3-201ENST00000577781 2400 ntBASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF6Q9Y4K3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 TPRG1LP1-201ENST00000598702 760 ntBASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF6Q9Y4K3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAF6Q9Y4K3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAF6Q9Y4K3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRAF6Q9Y4K3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAF6Q9Y4K3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.02■□□□□ 0.79
TRAF6Q9Y4K3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF6Q9Y4K3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF6Q9Y4K3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF6Q9Y4K3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms