Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TPRKBQ9Y3C4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 BX664725.1-201ENST00000438252 379 ntBASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 pRNA.6-201ENST00000610482 90 ntBASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 pRNA.5-201ENST00000612139 90 ntBASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 pRNA.11-201ENST00000618423 90 ntBASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 pRNA.13-201ENST00000619112 90 ntBASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.8■□□□□ 0.6
TPRKBQ9Y3C4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 AIRN-201ENST00000601203 4374 ntBASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 TCF3P1-201ENST00000423021 1937 ntBASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 YBX1P4-201ENST00000392794 808 ntBASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 AP006587.3-201ENST00000525742 1516 ntBASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.79■□□□□ 0.6
TPRKBQ9Y3C4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 AC103834.1-201ENST00000520383 144 ntBASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPRKBQ9Y3C4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 MTDHP2-201ENST00000601468 714 ntBASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.77■□□□□ 0.6
TPRKBQ9Y3C4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.77■□□□□ 0.59
TPRKBQ9Y3C4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
TPRKBQ9Y3C4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 OR2I1P-207ENST00000453522 948 ntBASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 AC092028.1-203ENST00000608262 953 ntBASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPRKBQ9Y3C4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms