Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
EXOSC1Q9Y3B2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 SYT6-210ENST00000641643 1587 ntBASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 SERBP1P1-201ENST00000396021 1160 ntBASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.43■□□□□ 0.54
EXOSC1Q9Y3B2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 DUX4L19-201ENST00000557448 1267 ntBASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.42■□□□□ 0.54
EXOSC1Q9Y3B2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 AC009237.3-201ENST00000393279 1427 ntBASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 AC011298.3-201ENST00000615796 283 ntBASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.41■□□□□ 0.54
EXOSC1Q9Y3B2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 RARRES2P1-201ENST00000474487 481 ntBASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 TCF3P1-201ENST00000423021 1937 ntBASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 AC092720.2-201ENST00000602388 1665 ntBASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXOSC1Q9Y3B2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
EXOSC1Q9Y3B2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
EXOSC1Q9Y3B2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
EXOSC1Q9Y3B2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.54
EXOSC1Q9Y3B2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
EXOSC1Q9Y3B2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
EXOSC1Q9Y3B2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
EXOSC1Q9Y3B2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms