Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 FEM1AP4-201ENST00000443167 1987 ntBASIC21.87■■□□□ 1.09
CDH9Q9ULB4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH9Q9ULB4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 AC011484.1-201ENST00000377652 1995 ntBASIC21.86■■□□□ 1.09
CDH9Q9ULB4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH9Q9ULB4 KRT17P1-201ENST00000399211 1546 ntBASIC21.85■■□□□ 1.09
CDH9Q9ULB4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 KRT18P68-201ENST00000392293 1000 ntBASIC21.85■■□□□ 1.09
CDH9Q9ULB4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH9Q9ULB4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 AL589743.5-201ENST00000616611 1050 ntBASIC21.84■■□□□ 1.09
CDH9Q9ULB4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.84■■□□□ 1.09
CDH9Q9ULB4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.83■■□□□ 1.09
CDH9Q9ULB4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 AC091874.3-201ENST00000512672 1195 ntBASIC21.83■■□□□ 1.09
CDH9Q9ULB4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.83■■□□□ 1.09
CDH9Q9ULB4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH9Q9ULB4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 DUSP5P2-201ENST00000426873 1033 ntBASIC21.82■■□□□ 1.08
CDH9Q9ULB4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 AC097658.1-201ENST00000475555 843 ntBASIC21.82■■□□□ 1.08
CDH9Q9ULB4 KRT18P6-201ENST00000555540 1265 ntBASIC21.82■■□□□ 1.08
CDH9Q9ULB4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 MYC-209ENST00000641252 345 ntBASIC21.82■■□□□ 1.08
CDH9Q9ULB4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH9Q9ULB4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms