Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 AC016769.1-201ENST00000409132 1010 ntBASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRNA9Q9UGM1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 RARRES2P11-201ENST00000635158 484 ntBASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRNA9Q9UGM1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CHRNA9Q9UGM1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 AC243732.1-201ENST00000612648 864 ntBASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA9Q9UGM1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA9Q9UGM1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA9Q9UGM1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA9Q9UGM1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA9Q9UGM1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA9Q9UGM1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms