Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
RNF146Q9NTX7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.58■■□□□ 1.36
RNF146Q9NTX7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF146Q9NTX7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RNF146Q9NTX7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF146Q9NTX7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.36
RNF146Q9NTX7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.58■■□□□ 1.36
RNF146Q9NTX7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RNF146Q9NTX7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.57■■□□□ 1.36
RNF146Q9NTX7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF146Q9NTX7 AC087633.2-202ENST00000565166 1439 ntBASIC23.57■■□□□ 1.36
RNF146Q9NTX7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 AL158047.1-201ENST00000445918 881 ntBASIC23.56■■□□□ 1.36
RNF146Q9NTX7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 AC142381.4-202ENST00000563973 229 ntBASIC23.56■■□□□ 1.36
RNF146Q9NTX7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RNF146Q9NTX7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF146Q9NTX7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.54■■□□□ 1.36
RNF146Q9NTX7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 UNC93B4-201ENST00000505679 747 ntBASIC23.54■■□□□ 1.36
RNF146Q9NTX7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF146Q9NTX7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 AL117328.2-201ENST00000624617 1940 ntBASIC23.53■■□□□ 1.36
RNF146Q9NTX7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.53■■□□□ 1.36
RNF146Q9NTX7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF146Q9NTX7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.52■■□□□ 1.36
RNF146Q9NTX7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
RNF146Q9NTX7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF146Q9NTX7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF146Q9NTX7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF146Q9NTX7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF146Q9NTX7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF146Q9NTX7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF146Q9NTX7 C2orf69P4-201ENST00000565394 541 ntBASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms