Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CISHQ9NSE2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.02■■□□□ 1.12
CISHQ9NSE2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CISHQ9NSE2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CISHQ9NSE2 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.02■■□□□ 1.12
CISHQ9NSE2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CISHQ9NSE2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.02■■□□□ 1.12
CISHQ9NSE2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CISHQ9NSE2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.02■■□□□ 1.12
CISHQ9NSE2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CISHQ9NSE2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.02■■□□□ 1.12
CISHQ9NSE2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CISHQ9NSE2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CISHQ9NSE2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CISHQ9NSE2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
CISHQ9NSE2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
CISHQ9NSE2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
CISHQ9NSE2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.01■■□□□ 1.11
CISHQ9NSE2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
CISHQ9NSE2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CISHQ9NSE2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CISHQ9NSE2 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.01■■□□□ 1.11
CISHQ9NSE2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.01■■□□□ 1.11
CISHQ9NSE2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CISHQ9NSE2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CISHQ9NSE2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.01■■□□□ 1.11
CISHQ9NSE2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CISHQ9NSE2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.01■■□□□ 1.11
CISHQ9NSE2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CISHQ9NSE2 PKD1P6-201ENST00000343738 4769 ntBASIC22.01■■□□□ 1.11
CISHQ9NSE2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.01■■□□□ 1.11
CISHQ9NSE2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CISHQ9NSE2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CISHQ9NSE2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
CISHQ9NSE2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22■■□□□ 1.11
CISHQ9NSE2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22■■□□□ 1.11
CISHQ9NSE2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22■■□□□ 1.11
CISHQ9NSE2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22■■□□□ 1.11
CISHQ9NSE2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
CISHQ9NSE2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22■■□□□ 1.11
CISHQ9NSE2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22■■□□□ 1.11
CISHQ9NSE2 AC026185.1-201ENST00000445748 174 ntBASIC22■■□□□ 1.11
CISHQ9NSE2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22■■□□□ 1.11
CISHQ9NSE2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22■■□□□ 1.11
CISHQ9NSE2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22■■□□□ 1.11
CISHQ9NSE2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22■■□□□ 1.11
CISHQ9NSE2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22■■□□□ 1.11
CISHQ9NSE2 AC005181.1-201ENST00000604782 1256 ntBASIC22■■□□□ 1.11
CISHQ9NSE2 FAM21FP-204ENST00000608637 956 ntBASIC22■■□□□ 1.11
CISHQ9NSE2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CISHQ9NSE2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CISHQ9NSE2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22■■□□□ 1.11
CISHQ9NSE2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.99■■□□□ 1.11
CISHQ9NSE2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CISHQ9NSE2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.99■■□□□ 1.11
CISHQ9NSE2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CISHQ9NSE2 CYP2T1P-201ENST00000432607 1285 ntBASIC21.99■■□□□ 1.11
CISHQ9NSE2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.99■■□□□ 1.11
CISHQ9NSE2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
CISHQ9NSE2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CISHQ9NSE2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.99■■□□□ 1.11
CISHQ9NSE2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.99■■□□□ 1.11
CISHQ9NSE2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CISHQ9NSE2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CISHQ9NSE2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CISHQ9NSE2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
CISHQ9NSE2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CISHQ9NSE2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.98■■□□□ 1.11
CISHQ9NSE2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.98■■□□□ 1.11
CISHQ9NSE2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.98■■□□□ 1.11
CISHQ9NSE2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.98■■□□□ 1.11
CISHQ9NSE2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.98■■□□□ 1.11
CISHQ9NSE2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CISHQ9NSE2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.98■■□□□ 1.11
CISHQ9NSE2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CISHQ9NSE2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CISHQ9NSE2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CISHQ9NSE2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.97■■□□□ 1.11
CISHQ9NSE2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CISHQ9NSE2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CISHQ9NSE2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.97■■□□□ 1.11
CISHQ9NSE2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CISHQ9NSE2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CISHQ9NSE2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CISHQ9NSE2 CROCCP5-201ENST00000436658 830 ntBASIC21.97■■□□□ 1.11
CISHQ9NSE2 RARRES2P4-201ENST00000514074 484 ntBASIC21.97■■□□□ 1.11
CISHQ9NSE2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.97■■□□□ 1.11
CISHQ9NSE2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CISHQ9NSE2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms