Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.27■■□□□ 1
VPS45Q9NRW7 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.27■■□□□ 1
VPS45Q9NRW7 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.27■■□□□ 1
VPS45Q9NRW7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.27■■□□□ 1
VPS45Q9NRW7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.27■■□□□ 1
VPS45Q9NRW7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.27■■□□□ 1
VPS45Q9NRW7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
VPS45Q9NRW7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS45Q9NRW7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
VPS45Q9NRW7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VPS45Q9NRW7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
VPS45Q9NRW7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VPS45Q9NRW7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.27■□□□□ 0.99
VPS45Q9NRW7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
VPS45Q9NRW7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.27■□□□□ 0.99
VPS45Q9NRW7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 POU5F1P4-201ENST00000413175 1085 ntBASIC21.26■□□□□ 0.99
VPS45Q9NRW7 CYP2T1P-201ENST00000432607 1285 ntBASIC21.26■□□□□ 0.99
VPS45Q9NRW7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 AC098590.1-201ENST00000468126 897 ntBASIC21.26■□□□□ 0.99
VPS45Q9NRW7 TERF1P5-201ENST00000477545 1207 ntBASIC21.26■□□□□ 0.99
VPS45Q9NRW7 RARRES2P4-201ENST00000514074 484 ntBASIC21.26■□□□□ 0.99
VPS45Q9NRW7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 AC008175.2-201ENST00000612840 297 ntBASIC21.26■□□□□ 0.99
VPS45Q9NRW7 OR10C1-204ENST00000622521 1039 ntBASIC21.26■□□□□ 0.99
VPS45Q9NRW7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VPS45Q9NRW7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 GCSHP5-201ENST00000443090 522 ntBASIC21.25■□□□□ 0.99
VPS45Q9NRW7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
VPS45Q9NRW7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 AC068338.2-201ENST00000563278 1430 ntBASIC21.24■□□□□ 0.99
VPS45Q9NRW7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 AC008694.1-202ENST00000636953 945 ntBASIC21.24■□□□□ 0.99
VPS45Q9NRW7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS45Q9NRW7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 PKD1P6-201ENST00000343738 4769 ntBASIC21.23■□□□□ 0.99
VPS45Q9NRW7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS45Q9NRW7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 ESRRAP1-201ENST00000400596 1257 ntBASIC21.22■□□□□ 0.99
VPS45Q9NRW7 AL512625.2-201ENST00000417533 625 ntBASIC21.22■□□□□ 0.99
VPS45Q9NRW7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 AC007322.4-201ENST00000509611 723 ntBASIC21.22■□□□□ 0.99
VPS45Q9NRW7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms