Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GDF3Q9NR23 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDF3Q9NR23 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDF3Q9NR23 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
GDF3Q9NR23 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GDF3Q9NR23 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.75■■□□□ 1.07
GDF3Q9NR23 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDF3Q9NR23 PCDHAC2-203ENST00000615316 3011 ntBASIC21.75■■□□□ 1.07
GDF3Q9NR23 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDF3Q9NR23 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDF3Q9NR23 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.75■■□□□ 1.07
GDF3Q9NR23 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDF3Q9NR23 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GDF3Q9NR23 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GDF3Q9NR23 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GDF3Q9NR23 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GDF3Q9NR23 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GDF3Q9NR23 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GDF3Q9NR23 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 AC087239.1-201ENST00000622671 572 ntBASIC21.74■■□□□ 1.07
GDF3Q9NR23 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GDF3Q9NR23 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GDF3Q9NR23 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
GDF3Q9NR23 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.73■■□□□ 1.07
GDF3Q9NR23 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF3Q9NR23 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.73■■□□□ 1.07
GDF3Q9NR23 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
GDF3Q9NR23 AC020907.5-201ENST00000624372 1936 ntBASIC21.73■■□□□ 1.07
GDF3Q9NR23 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.73■■□□□ 1.07
GDF3Q9NR23 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF3Q9NR23 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.73■■□□□ 1.07
GDF3Q9NR23 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.73■■□□□ 1.07
GDF3Q9NR23 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.73■■□□□ 1.07
GDF3Q9NR23 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
GDF3Q9NR23 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF3Q9NR23 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.72■■□□□ 1.07
GDF3Q9NR23 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.72■■□□□ 1.07
GDF3Q9NR23 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.72■■□□□ 1.07
GDF3Q9NR23 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GDF3Q9NR23 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GDF3Q9NR23 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
GDF3Q9NR23 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.72■■□□□ 1.07
GDF3Q9NR23 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GDF3Q9NR23 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
GDF3Q9NR23 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
GDF3Q9NR23 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
GDF3Q9NR23 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GDF3Q9NR23 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.72■■□□□ 1.07
GDF3Q9NR23 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
GDF3Q9NR23 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GDF3Q9NR23 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
GDF3Q9NR23 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GDF3Q9NR23 AP004607.7-201ENST00000527152 1677 ntBASIC21.72■■□□□ 1.07
GDF3Q9NR23 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GDF3Q9NR23 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GDF3Q9NR23 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GDF3Q9NR23 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
GDF3Q9NR23 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
GDF3Q9NR23 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
GDF3Q9NR23 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GDF3Q9NR23 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
GDF3Q9NR23 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.71■■□□□ 1.07
GDF3Q9NR23 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
GDF3Q9NR23 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
GDF3Q9NR23 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.71■■□□□ 1.07
GDF3Q9NR23 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GDF3Q9NR23 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
GDF3Q9NR23 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GDF3Q9NR23 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.07
GDF3Q9NR23 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.7■■□□□ 1.06
GDF3Q9NR23 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.7■■□□□ 1.06
GDF3Q9NR23 AL162377.1-201ENST00000618844 1793 ntBASIC21.7■■□□□ 1.06
GDF3Q9NR23 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.7■■□□□ 1.06
GDF3Q9NR23 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GDF3Q9NR23 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GDF3Q9NR23 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GDF3Q9NR23 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GDF3Q9NR23 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
GDF3Q9NR23 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.7■■□□□ 1.06
GDF3Q9NR23 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.69■■□□□ 1.06
GDF3Q9NR23 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.69■■□□□ 1.06
GDF3Q9NR23 AC007225.1-201ENST00000566331 1836 ntBASIC21.69■■□□□ 1.06
GDF3Q9NR23 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms