Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 GPX1P1-201ENST00000388829 606 ntBASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNMB3Q9NPA1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 TSPY6P-201ENST00000448518 926 ntBASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 AC027702.1-201ENST00000563810 1770 ntBASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNMB3Q9NPA1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 AC104771.1-201ENST00000603335 964 ntBASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 CYP21A1P-202ENST00000354927 1481 ntBASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KCNMB3Q9NPA1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 ID1-201ENST00000376105 1233 ntBASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNMB3Q9NPA1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 HLA-L-209ENST00000420110 1011 ntBASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 AL109923.1-201ENST00000618799 583 ntBASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 AC006128.1-201ENST00000624704 1661 ntBASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNMB3Q9NPA1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNMB3Q9NPA1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNMB3Q9NPA1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNMB3Q9NPA1 MCRIP2P1-201ENST00000394346 511 ntBASIC23.18■■□□□ 1.3
KCNMB3Q9NPA1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms