Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC087742.1-201ENST00000575880 1738 ntBASIC21.56■■□□□ 1.04
CD248Q9HCU0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.56■■□□□ 1.04
CD248Q9HCU0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.56■■□□□ 1.04
CD248Q9HCU0 AL034346.1-201ENST00000568244 1277 ntBASIC21.56■■□□□ 1.04
CD248Q9HCU0 AC133552.2-202ENST00000575694 574 ntBASIC21.56■■□□□ 1.04
CD248Q9HCU0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CD248Q9HCU0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.56■■□□□ 1.04
CD248Q9HCU0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.56■■□□□ 1.04
CD248Q9HCU0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD248Q9HCU0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD248Q9HCU0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD248Q9HCU0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD248Q9HCU0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD248Q9HCU0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD248Q9HCU0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD248Q9HCU0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CD248Q9HCU0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CD248Q9HCU0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CD248Q9HCU0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD248Q9HCU0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.55■■□□□ 1.04
CD248Q9HCU0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD248Q9HCU0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.55■■□□□ 1.04
CD248Q9HCU0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CD248Q9HCU0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD248Q9HCU0 AC053503.5-201ENST00000601508 636 ntBASIC21.55■■□□□ 1.04
CD248Q9HCU0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.55■■□□□ 1.04
CD248Q9HCU0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD248Q9HCU0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD248Q9HCU0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD248Q9HCU0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD248Q9HCU0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CD248Q9HCU0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.54■■□□□ 1.04
CD248Q9HCU0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.54■■□□□ 1.04
CD248Q9HCU0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.54■■□□□ 1.04
CD248Q9HCU0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD248Q9HCU0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD248Q9HCU0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
CD248Q9HCU0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CD248Q9HCU0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CD248Q9HCU0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.54■■□□□ 1.04
CD248Q9HCU0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.54■■□□□ 1.04
CD248Q9HCU0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.54■■□□□ 1.04
CD248Q9HCU0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.54■■□□□ 1.04
CD248Q9HCU0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD248Q9HCU0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CD248Q9HCU0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CD248Q9HCU0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
CD248Q9HCU0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD248Q9HCU0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CD248Q9HCU0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.53■■□□□ 1.04
CD248Q9HCU0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.53■■□□□ 1.04
CD248Q9HCU0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.53■■□□□ 1.04
CD248Q9HCU0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD248Q9HCU0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD248Q9HCU0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CD248Q9HCU0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.53■■□□□ 1.04
CD248Q9HCU0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.53■■□□□ 1.04
CD248Q9HCU0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.52■■□□□ 1.04
CD248Q9HCU0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.52■■□□□ 1.04
CD248Q9HCU0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CD248Q9HCU0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.52■■□□□ 1.04
CD248Q9HCU0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
CD248Q9HCU0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CD248Q9HCU0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 CD99P1-205ENST00000527459 561 ntBASIC21.52■■□□□ 1.04
CD248Q9HCU0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CD248Q9HCU0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.52■■□□□ 1.04
CD248Q9HCU0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.52■■□□□ 1.04
CD248Q9HCU0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CD248Q9HCU0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD248Q9HCU0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.52■■□□□ 1.03
CD248Q9HCU0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CD248Q9HCU0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD248Q9HCU0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CD248Q9HCU0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.51■■□□□ 1.03
CD248Q9HCU0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.51■■□□□ 1.03
CD248Q9HCU0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD248Q9HCU0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD248Q9HCU0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD248Q9HCU0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CD248Q9HCU0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CD248Q9HCU0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.51■■□□□ 1.03
CD248Q9HCU0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.51■■□□□ 1.03
CD248Q9HCU0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.51■■□□□ 1.03
CD248Q9HCU0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CD248Q9HCU0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD248Q9HCU0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD248Q9HCU0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms