Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 RPS2P55-201ENST00000397318 883 ntBASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 FAM210CP-201ENST00000445714 574 ntBASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 AC107956.1-201ENST00000494359 873 ntBASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RC3H2Q9HBD1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 REXO1L12P-201ENST00000622156 912 ntBASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.15■■□□□ 1.14
RC3H2Q9HBD1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RC3H2Q9HBD1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
RC3H2Q9HBD1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RC3H2Q9HBD1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RC3H2Q9HBD1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 BX088651.1-201ENST00000540551 451 ntBASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RC3H2Q9HBD1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H2Q9HBD1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H2Q9HBD1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H2Q9HBD1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.12■■□□□ 1.13
RC3H2Q9HBD1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H2Q9HBD1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H2Q9HBD1 AC005829.2-201ENST00000571422 1056 ntBASIC22.12■■□□□ 1.13
RC3H2Q9HBD1 AC120498.8-201ENST00000614275 531 ntBASIC22.12■■□□□ 1.13
RC3H2Q9HBD1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RC3H2Q9HBD1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H2Q9HBD1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RC3H2Q9HBD1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RC3H2Q9HBD1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H2Q9HBD1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RC3H2Q9HBD1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H2Q9HBD1 TSPY7P-201ENST00000431358 1114 ntBASIC22.11■■□□□ 1.13
RC3H2Q9HBD1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H2Q9HBD1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.11■■□□□ 1.13
RC3H2Q9HBD1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RC3H2Q9HBD1 LINC01023-201ENST00000606054 436 ntBASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms