Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 LINC01521-201ENST00000504184 1943 ntBASIC25.97■■□□□ 1.75
CHMP4BQ9H444 AC007322.3-201ENST00000426526 701 ntBASIC25.97■■□□□ 1.75
CHMP4BQ9H444 CDV3P1-201ENST00000471403 739 ntBASIC25.97■■□□□ 1.75
CHMP4BQ9H444 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CHMP4BQ9H444 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CHMP4BQ9H444 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.95■■□□□ 1.75
CHMP4BQ9H444 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CHMP4BQ9H444 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
CHMP4BQ9H444 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 AC026271.2-201ENST00000428091 497 ntBASIC25.95■■□□□ 1.74
CHMP4BQ9H444 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 RARRES2P6-201ENST00000567333 442 ntBASIC25.95■■□□□ 1.74
CHMP4BQ9H444 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 GABARAPL3-202ENST00000624044 1851 ntBASIC25.95■■□□□ 1.74
CHMP4BQ9H444 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC25.95■■□□□ 1.74
CHMP4BQ9H444 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.94■■□□□ 1.74
CHMP4BQ9H444 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 KRT18P5-201ENST00000436075 1291 ntBASIC25.93■■□□□ 1.74
CHMP4BQ9H444 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 FP700111.2-201ENST00000619190 1892 ntBASIC25.93■■□□□ 1.74
CHMP4BQ9H444 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHMP4BQ9H444 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms