Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF38Q9H0F5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 AL589743.5-201ENST00000616611 1050 ntBASIC21.44■■□□□ 1.02
RNF38Q9H0F5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF38Q9H0F5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF38Q9H0F5 Z98882.1-201ENST00000622160 2253 ntBASIC21.43■■□□□ 1.02
RNF38Q9H0F5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF38Q9H0F5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 AC079834.2-201ENST00000609776 1949 ntBASIC21.41■■□□□ 1.02
RNF38Q9H0F5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF38Q9H0F5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RNF38Q9H0F5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF38Q9H0F5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.39■■□□□ 1.02
RNF38Q9H0F5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RNF38Q9H0F5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 ESRRAP1-201ENST00000400596 1257 ntBASIC21.39■■□□□ 1.01
RNF38Q9H0F5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 ITM2C-210ENST00000620962 501 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms