Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 FAM99A-202ENST00000538190 1989 ntBASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 BX088651.1-201ENST00000540551 451 ntBASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 AC124016.1-201ENST00000609552 612 ntBASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 AC116050.2-201ENST00000612102 1779 ntBASIC25.26■■□□□ 1.63
RTFDC1Q9BY42 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 LINC01023-201ENST00000606054 436 ntBASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.25■■□□□ 1.63
RTFDC1Q9BY42 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RTFDC1Q9BY42 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 MIR1224-201ENST00000408193 85 ntBASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.23■■□□□ 1.63
RTFDC1Q9BY42 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.22■■□□□ 1.63
RTFDC1Q9BY42 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RTFDC1Q9BY42 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.22■■□□□ 1.63
RTFDC1Q9BY42 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.22■■□□□ 1.63
RTFDC1Q9BY42 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
RTFDC1Q9BY42 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.22■■□□□ 1.63
RTFDC1Q9BY42 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.22■■□□□ 1.63
RTFDC1Q9BY42 AC120498.8-201ENST00000614275 531 ntBASIC25.22■■□□□ 1.63
RTFDC1Q9BY42 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RTFDC1Q9BY42 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 AC087633.2-202ENST00000565166 1439 ntBASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTFDC1Q9BY42 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms