Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 SUDS3P1-201ENST00000505831 966 ntBASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 AC011298.3-201ENST00000615796 283 ntBASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 AL032819.2-201ENST00000624543 2162 ntBASIC15.82■□□□□ 0.12
NDUFAF3Q9BU61 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 SERBP1P1-201ENST00000396021 1160 ntBASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 AF213884.3-201ENST00000563833 479 ntBASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFAF3Q9BU61 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 PCDHAC2-203ENST00000615316 3011 ntBASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 AC091305.1-201ENST00000479476 895 ntBASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 MIR4767-201ENST00000582827 78 ntBASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 AL031432.3-201ENST00000607698 485 ntBASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 AC087742.1-201ENST00000575880 1738 ntBASIC15.8■□□□□ 0.12
NDUFAF3Q9BU61 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 AP000974.1-201ENST00000623909 2387 ntBASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.79■□□□□ 0.12
NDUFAF3Q9BU61 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms