Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDC1Q9BTX1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 AL137060.1-201ENST00000618151 2648 ntBASIC19.68■□□□□ 0.74
NDC1Q9BTX1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 AC007322.3-201ENST00000426526 701 ntBASIC19.68■□□□□ 0.74
NDC1Q9BTX1 AC073210.2-201ENST00000430369 194 ntBASIC19.68■□□□□ 0.74
NDC1Q9BTX1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 AC244015.2-201ENST00000616358 1861 ntBASIC19.68■□□□□ 0.74
NDC1Q9BTX1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDC1Q9BTX1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 FBXW4P1-201ENST00000426721 2239 ntBASIC19.67■□□□□ 0.74
NDC1Q9BTX1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NDC1Q9BTX1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 AC092118.2-201ENST00000613495 667 ntBASIC19.66■□□□□ 0.74
NDC1Q9BTX1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDC1Q9BTX1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.65■□□□□ 0.74
NDC1Q9BTX1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.65■□□□□ 0.74
NDC1Q9BTX1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NDC1Q9BTX1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
NDC1Q9BTX1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
NDC1Q9BTX1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
NDC1Q9BTX1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.64■□□□□ 0.73
NDC1Q9BTX1 AC100791.3-201ENST00000617619 330 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms