Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CYP2T1P-201ENST00000432607 1285 ntBASIC14.31□□□□□ -0.12
UPK3BQ9BT76 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 AC083906.2-201ENST00000511578 360 ntBASIC14.31□□□□□ -0.12
UPK3BQ9BT76 AF201337.1-201ENST00000520239 748 ntBASIC14.31□□□□□ -0.12
UPK3BQ9BT76 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 AL591742.1-201ENST00000604433 565 ntBASIC14.31□□□□□ -0.12
UPK3BQ9BT76 AC008694.1-202ENST00000636953 945 ntBASIC14.31□□□□□ -0.12
UPK3BQ9BT76 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
UPK3BQ9BT76 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 TSPY6P-201ENST00000448518 926 ntBASIC14.3□□□□□ -0.12
UPK3BQ9BT76 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK3BQ9BT76 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 SLC29A4P1-201ENST00000398760 971 ntBASIC14.29□□□□□ -0.12
UPK3BQ9BT76 AL512625.2-201ENST00000417533 625 ntBASIC14.29□□□□□ -0.12
UPK3BQ9BT76 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 AC142086.2-201ENST00000569753 217 ntBASIC14.29□□□□□ -0.12
UPK3BQ9BT76 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.29□□□□□ -0.12
UPK3BQ9BT76 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 AC073130.3-201ENST00000624389 2278 ntBASIC14.29□□□□□ -0.12
UPK3BQ9BT76 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK3BQ9BT76 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK3BQ9BT76 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms