Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VRK1Q99986 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VRK1Q99986 AC244015.2-201ENST00000616358 1861 ntBASIC18.11■□□□□ 0.49
VRK1Q99986 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.11■□□□□ 0.49
VRK1Q99986 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VRK1Q99986 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
VRK1Q99986 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VRK1Q99986 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VRK1Q99986 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
VRK1Q99986 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VRK1Q99986 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
VRK1Q99986 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.1■□□□□ 0.49
VRK1Q99986 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK1Q99986 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.1■□□□□ 0.49
VRK1Q99986 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VRK1Q99986 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VRK1Q99986 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.1■□□□□ 0.49
VRK1Q99986 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK1Q99986 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VRK1Q99986 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VRK1Q99986 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.1■□□□□ 0.49
VRK1Q99986 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.1■□□□□ 0.49
VRK1Q99986 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.1■□□□□ 0.49
VRK1Q99986 MFSD11-216ENST00000590393 1141 ntBASIC18.1■□□□□ 0.49
VRK1Q99986 RAP2CP1-201ENST00000605103 478 ntBASIC18.1■□□□□ 0.49
VRK1Q99986 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK1Q99986 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK1Q99986 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VRK1Q99986 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
VRK1Q99986 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.09■□□□□ 0.49
VRK1Q99986 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
VRK1Q99986 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.09■□□□□ 0.49
VRK1Q99986 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK1Q99986 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.09■□□□□ 0.49
VRK1Q99986 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK1Q99986 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK1Q99986 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
VRK1Q99986 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.09■□□□□ 0.49
VRK1Q99986 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.09■□□□□ 0.49
VRK1Q99986 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.09■□□□□ 0.49
VRK1Q99986 AC138907.5-202ENST00000569484 235 ntBASIC18.09■□□□□ 0.49
VRK1Q99986 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.09■□□□□ 0.49
VRK1Q99986 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK1Q99986 MYCNOS-205ENST00000641950 531 ntBASIC18.09■□□□□ 0.49
VRK1Q99986 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
VRK1Q99986 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VRK1Q99986 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
VRK1Q99986 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK1Q99986 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK1Q99986 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.09■□□□□ 0.49
VRK1Q99986 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.09■□□□□ 0.49
VRK1Q99986 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK1Q99986 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK1Q99986 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VRK1Q99986 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VRK1Q99986 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.08■□□□□ 0.49
VRK1Q99986 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VRK1Q99986 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VRK1Q99986 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.08■□□□□ 0.49
VRK1Q99986 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.08■□□□□ 0.48
VRK1Q99986 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.08■□□□□ 0.48
VRK1Q99986 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VRK1Q99986 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VRK1Q99986 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 AL391422.3-201ENST00000603791 2761 ntBASIC18.07■□□□□ 0.48
VRK1Q99986 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.07■□□□□ 0.48
VRK1Q99986 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 MIR663A-201ENST00000385250 93 ntBASIC18.07■□□□□ 0.48
VRK1Q99986 CROCCP5-201ENST00000436658 830 ntBASIC18.07■□□□□ 0.48
VRK1Q99986 AC010141.2-201ENST00000452426 721 ntBASIC18.07■□□□□ 0.48
VRK1Q99986 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.07■□□□□ 0.48
VRK1Q99986 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VRK1Q99986 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.07■□□□□ 0.48
VRK1Q99986 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
VRK1Q99986 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.07■□□□□ 0.48
VRK1Q99986 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms