Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF5Q99942 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF5Q99942 AL591742.1-201ENST00000604433 565 ntBASIC16.48■□□□□ 0.23
RNF5Q99942 AC013268.1-206ENST00000638368 961 ntBASIC16.48■□□□□ 0.23
RNF5Q99942 AC112229.1-201ENST00000639295 961 ntBASIC16.48■□□□□ 0.23
RNF5Q99942 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF5Q99942 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RNF5Q99942 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF5Q99942 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF5Q99942 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF5Q99942 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF5Q99942 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RNF5Q99942 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF5Q99942 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF5Q99942 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF5Q99942 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF5Q99942 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 FAM21FP-204ENST00000608637 956 ntBASIC16.47■□□□□ 0.23
RNF5Q99942 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF5Q99942 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF5Q99942 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RNF5Q99942 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.47■□□□□ 0.23
RNF5Q99942 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RNF5Q99942 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF5Q99942 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF5Q99942 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RNF5Q99942 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF5Q99942 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF5Q99942 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
RNF5Q99942 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF5Q99942 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RNF5Q99942 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF5Q99942 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF5Q99942 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RNF5Q99942 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF5Q99942 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF5Q99942 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF5Q99942 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF5Q99942 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RNF5Q99942 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF5Q99942 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF5Q99942 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RNF5Q99942 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
RNF5Q99942 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF5Q99942 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF5Q99942 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RNF5Q99942 PGM5P4-201ENST00000421970 445 ntBASIC16.45■□□□□ 0.22
RNF5Q99942 AC006015.1-201ENST00000429970 570 ntBASIC16.45■□□□□ 0.22
RNF5Q99942 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF5Q99942 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
RNF5Q99942 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.45■□□□□ 0.22
RNF5Q99942 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 MIR2861-201ENST00000636310 90 ntBASIC16.45■□□□□ 0.22
RNF5Q99942 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF5Q99942 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF5Q99942 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF5Q99942 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF5Q99942 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF5Q99942 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF5Q99942 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF5Q99942 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF5Q99942 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF5Q99942 FEM1AP1-201ENST00000431297 1995 ntBASIC16.44■□□□□ 0.22
RNF5Q99942 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF5Q99942 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RNF5Q99942 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF5Q99942 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF5Q99942 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms