Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.07■□□□□ 0.8
PKP4Q99569 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PKP4Q99569 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.07■□□□□ 0.8
PKP4Q99569 AC013268.1-206ENST00000638368 961 ntBASIC20.07■□□□□ 0.8
PKP4Q99569 AC112229.1-201ENST00000639295 961 ntBASIC20.07■□□□□ 0.8
PKP4Q99569 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PKP4Q99569 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PKP4Q99569 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PKP4Q99569 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PKP4Q99569 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.07■□□□□ 0.8
PKP4Q99569 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PKP4Q99569 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PKP4Q99569 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PKP4Q99569 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PKP4Q99569 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PKP4Q99569 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.07■□□□□ 0.8
PKP4Q99569 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
PKP4Q99569 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP4Q99569 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
PKP4Q99569 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PKP4Q99569 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.06■□□□□ 0.8
PKP4Q99569 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP4Q99569 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP4Q99569 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PKP4Q99569 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
PKP4Q99569 CNN2P6-201ENST00000439038 900 ntBASIC20.06■□□□□ 0.8
PKP4Q99569 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.06■□□□□ 0.8
PKP4Q99569 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.06■□□□□ 0.8
PKP4Q99569 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PKP4Q99569 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.06■□□□□ 0.8
PKP4Q99569 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.06■□□□□ 0.8
PKP4Q99569 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PKP4Q99569 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP4Q99569 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP4Q99569 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP4Q99569 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP4Q99569 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.06■□□□□ 0.8
PKP4Q99569 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PKP4Q99569 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.05■□□□□ 0.8
PKP4Q99569 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PKP4Q99569 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP4Q99569 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PKP4Q99569 AC007322.4-201ENST00000509611 723 ntBASIC20.05■□□□□ 0.8
PKP4Q99569 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.05■□□□□ 0.8
PKP4Q99569 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.05■□□□□ 0.8
PKP4Q99569 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.05■□□□□ 0.8
PKP4Q99569 AC080038.1-201ENST00000611274 1154 ntBASIC20.05■□□□□ 0.8
PKP4Q99569 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP4Q99569 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.05■□□□□ 0.8
PKP4Q99569 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.05■□□□□ 0.8
PKP4Q99569 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.04■□□□□ 0.8
PKP4Q99569 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP4Q99569 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP4Q99569 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP4Q99569 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PKP4Q99569 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PKP4Q99569 AC007322.3-201ENST00000426526 701 ntBASIC20.04■□□□□ 0.8
PKP4Q99569 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.04■□□□□ 0.8
PKP4Q99569 AL591742.1-201ENST00000604433 565 ntBASIC20.04■□□□□ 0.8
PKP4Q99569 AC092666.2-201ENST00000613287 246 ntBASIC20.04■□□□□ 0.8
PKP4Q99569 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PKP4Q99569 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PKP4Q99569 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP4Q99569 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PKP4Q99569 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
PKP4Q99569 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.03■□□□□ 0.8
PKP4Q99569 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PKP4Q99569 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PKP4Q99569 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PKP4Q99569 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 CDV3P1-201ENST00000471403 739 ntBASIC20.03■□□□□ 0.8
PKP4Q99569 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.03■□□□□ 0.8
PKP4Q99569 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.03■□□□□ 0.8
PKP4Q99569 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PKP4Q99569 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
PKP4Q99569 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP4Q99569 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP4Q99569 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.02■□□□□ 0.8
PKP4Q99569 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP4Q99569 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP4Q99569 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms