Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL020996.1-203ENST00000536896 2307 ntBASIC15.54■□□□□ 0.08
AP1S3Q96PC3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 AC079089.2-201ENST00000531211 1277 ntBASIC15.54■□□□□ 0.08
AP1S3Q96PC3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 AC007326.2-201ENST00000624224 7579 ntBASIC15.54■□□□□ 0.08
AP1S3Q96PC3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 OXCT2P1-201ENST00000447263 1535 ntBASIC15.53■□□□□ 0.08
AP1S3Q96PC3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S3Q96PC3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 AL031602.1-201ENST00000633169 911 ntBASIC15.52■□□□□ 0.08
AP1S3Q96PC3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
AP1S3Q96PC3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S3Q96PC3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S3Q96PC3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.52■□□□□ 0.07
AP1S3Q96PC3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S3Q96PC3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S3Q96PC3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
AP1S3Q96PC3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S3Q96PC3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
AP1S3Q96PC3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms