Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.44■□□□□ 0.7
COL21A1Q96P44 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.44■□□□□ 0.7
COL21A1Q96P44 AC138907.5-202ENST00000569484 235 ntBASIC19.44■□□□□ 0.7
COL21A1Q96P44 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
COL21A1Q96P44 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COL21A1Q96P44 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL21A1Q96P44 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COL21A1Q96P44 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL21A1Q96P44 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL21A1Q96P44 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
COL21A1Q96P44 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL21A1Q96P44 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL21A1Q96P44 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.43■□□□□ 0.7
COL21A1Q96P44 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL21A1Q96P44 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
COL21A1Q96P44 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL21A1Q96P44 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL21A1Q96P44 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL21A1Q96P44 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL21A1Q96P44 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.43■□□□□ 0.7
COL21A1Q96P44 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL21A1Q96P44 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL21A1Q96P44 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL21A1Q96P44 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
COL21A1Q96P44 LINC01006-201ENST00000333319 2292 ntBASIC19.42■□□□□ 0.7
COL21A1Q96P44 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL21A1Q96P44 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL21A1Q96P44 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL21A1Q96P44 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL21A1Q96P44 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL21A1Q96P44 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.42■□□□□ 0.7
COL21A1Q96P44 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.42■□□□□ 0.7
COL21A1Q96P44 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL21A1Q96P44 AP001160.3-201ENST00000601484 763 ntBASIC19.42■□□□□ 0.7
COL21A1Q96P44 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL21A1Q96P44 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.42■□□□□ 0.7
COL21A1Q96P44 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL21A1Q96P44 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL21A1Q96P44 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL21A1Q96P44 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL21A1Q96P44 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL21A1Q96P44 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL21A1Q96P44 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COL21A1Q96P44 AC010141.2-201ENST00000452426 721 ntBASIC19.41■□□□□ 0.7
COL21A1Q96P44 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.41■□□□□ 0.7
COL21A1Q96P44 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.41■□□□□ 0.7
COL21A1Q96P44 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL21A1Q96P44 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL21A1Q96P44 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
COL21A1Q96P44 PLK5-205ENST00000642079 1969 ntBASIC19.41■□□□□ 0.7
COL21A1Q96P44 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL21A1Q96P44 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 AC006128.1-201ENST00000624704 1661 ntBASIC19.4■□□□□ 0.7
COL21A1Q96P44 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 AC008175.2-201ENST00000612840 297 ntBASIC19.4■□□□□ 0.7
COL21A1Q96P44 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
COL21A1Q96P44 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL21A1Q96P44 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COL21A1Q96P44 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.39■□□□□ 0.69
COL21A1Q96P44 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL21A1Q96P44 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL21A1Q96P44 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COL21A1Q96P44 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms