Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 SLC25A3P1-201ENST00000443844 931 ntBASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 AC009947.2-201ENST00000444014 672 ntBASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 OR7E47P-201ENST00000546390 1422 ntBASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNTNAP3BQ96NU0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNTNAP3BQ96NU0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CNTNAP3BQ96NU0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 RBM17P1-201ENST00000453646 1190 ntBASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 AC006011.2-201ENST00000621313 1158 ntBASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 LINC01124-201ENST00000409786 2117 ntBASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3BQ96NU0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 MIR1238-201ENST00000408483 83 ntBASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms