Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AC053503.5-201ENST00000601508 636 ntBASIC17.85■□□□□ 0.45
CPNE2Q96FN4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.85■□□□□ 0.45
CPNE2Q96FN4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE2Q96FN4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 AP001330.3-201ENST00000520123 633 ntBASIC17.84■□□□□ 0.45
CPNE2Q96FN4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 GABARAPL3-202ENST00000624044 1851 ntBASIC17.84■□□□□ 0.45
CPNE2Q96FN4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE2Q96FN4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE2Q96FN4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE2Q96FN4 AP004607.4-201ENST00000530158 1459 ntBASIC17.83■□□□□ 0.45
CPNE2Q96FN4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.83■□□□□ 0.45
CPNE2Q96FN4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.83■□□□□ 0.45
CPNE2Q96FN4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.83■□□□□ 0.45
CPNE2Q96FN4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE2Q96FN4 HCG11-201ENST00000411553 5696 ntBASIC17.83■□□□□ 0.44
CPNE2Q96FN4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 AL157384.1-201ENST00000445995 2473 ntBASIC17.82■□□□□ 0.44
CPNE2Q96FN4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 AL354811.1-201ENST00000610286 706 ntBASIC17.82■□□□□ 0.44
CPNE2Q96FN4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CPNE2Q96FN4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 EEF1DP3-203ENST00000566025 782 ntBASIC17.81■□□□□ 0.44
CPNE2Q96FN4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 AC008175.2-201ENST00000612840 297 ntBASIC17.81■□□□□ 0.44
CPNE2Q96FN4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.81■□□□□ 0.44
CPNE2Q96FN4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms