Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 AC112907.3-201ENST00000577781 2400 ntBASIC19.41■□□□□ 0.7
SLC47A1Q96FL8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 FP700111.2-201ENST00000619190 1892 ntBASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 AL512408.1-201ENST00000569378 2000 ntBASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 RNF165-205ENST00000588679 2904 ntBASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC47A1Q96FL8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC47A1Q96FL8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SLC47A1Q96FL8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC47A1Q96FL8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 AL355001.2-201ENST00000620617 1191 ntBASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC47A1Q96FL8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 AC110285.6-201ENST00000617652 491 ntBASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 AL162377.1-201ENST00000618844 1793 ntBASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC47A1Q96FL8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 TSPY26P-201ENST00000476365 1326 ntBASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 AP001330.3-201ENST00000520123 633 ntBASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms