Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 AL512408.1-201ENST00000569378 2000 ntBASIC19.78■□□□□ 0.76
VPS33AQ96AX1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.78■□□□□ 0.76
VPS33AQ96AX1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 AC135279.3-201ENST00000610945 1311 ntBASIC19.77■□□□□ 0.76
VPS33AQ96AX1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VPS33AQ96AX1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.75
VPS33AQ96AX1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS33AQ96AX1 AC007952.6-201ENST00000573168 2673 ntBASIC19.76■□□□□ 0.75
VPS33AQ96AX1 AC003957.1-201ENST00000625108 2673 ntBASIC19.76■□□□□ 0.75
VPS33AQ96AX1 TSPY26P-201ENST00000476365 1326 ntBASIC19.76■□□□□ 0.75
VPS33AQ96AX1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 AC099791.1-201ENST00000416440 715 ntBASIC19.75■□□□□ 0.75
VPS33AQ96AX1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS33AQ96AX1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS33AQ96AX1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.74■□□□□ 0.75
VPS33AQ96AX1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms