Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
USP9XQ93008 DUX4L26-201ENST00000489078 1255 ntBASIC18.18■□□□□ 0.5
USP9XQ93008 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP9XQ93008 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP9XQ93008 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.18■□□□□ 0.5
USP9XQ93008 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.18■□□□□ 0.5
USP9XQ93008 AC005829.2-201ENST00000571422 1056 ntBASIC18.18■□□□□ 0.5
USP9XQ93008 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.18■□□□□ 0.5
USP9XQ93008 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
USP9XQ93008 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP9XQ93008 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP9XQ93008 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
USP9XQ93008 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP9XQ93008 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.17■□□□□ 0.5
USP9XQ93008 NUDT16P1-203ENST00000513809 620 ntBASIC18.17■□□□□ 0.5
USP9XQ93008 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.17■□□□□ 0.5
USP9XQ93008 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
USP9XQ93008 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.17■□□□□ 0.5
USP9XQ93008 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP9XQ93008 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP9XQ93008 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP9XQ93008 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.17■□□□□ 0.5
USP9XQ93008 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
USP9XQ93008 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.17■□□□□ 0.5
USP9XQ93008 CRYGFP-201ENST00000418459 633 ntBASIC18.17■□□□□ 0.5
USP9XQ93008 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP9XQ93008 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.17■□□□□ 0.5
USP9XQ93008 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.17■□□□□ 0.5
USP9XQ93008 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP9XQ93008 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP9XQ93008 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.16■□□□□ 0.5
USP9XQ93008 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP9XQ93008 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.16■□□□□ 0.5
USP9XQ93008 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
USP9XQ93008 WWOX-216ENST00000569818 525 ntBASIC18.16■□□□□ 0.5
USP9XQ93008 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.16■□□□□ 0.5
USP9XQ93008 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.16■□□□□ 0.5
USP9XQ93008 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.16■□□□□ 0.5
USP9XQ93008 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP9XQ93008 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP9XQ93008 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP9XQ93008 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP9XQ93008 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.15■□□□□ 0.5
USP9XQ93008 AC245052.3-201ENST00000450182 901 ntBASIC18.15■□□□□ 0.5
USP9XQ93008 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.15■□□□□ 0.5
USP9XQ93008 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.15■□□□□ 0.5
USP9XQ93008 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.15■□□□□ 0.5
USP9XQ93008 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.15■□□□□ 0.5
USP9XQ93008 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
USP9XQ93008 AC010947.1-201ENST00000623454 693 ntBASIC18.15■□□□□ 0.5
USP9XQ93008 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP9XQ93008 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP9XQ93008 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP9XQ93008 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.15■□□□□ 0.5
USP9XQ93008 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP9XQ93008 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP9XQ93008 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP9XQ93008 CYP2D8P-201ENST00000433633 1490 ntBASIC18.15■□□□□ 0.5
USP9XQ93008 AC079598.2-202ENST00000546624 1451 ntBASIC18.15■□□□□ 0.5
USP9XQ93008 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP9XQ93008 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
USP9XQ93008 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
USP9XQ93008 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.15■□□□□ 0.5
USP9XQ93008 AL355355.2-201ENST00000442321 338 ntBASIC18.15■□□□□ 0.5
USP9XQ93008 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.15■□□□□ 0.5
USP9XQ93008 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP9XQ93008 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP9XQ93008 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
USP9XQ93008 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.14■□□□□ 0.49
USP9XQ93008 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
USP9XQ93008 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
USP9XQ93008 SLC25A3P1-201ENST00000443844 931 ntBASIC18.14■□□□□ 0.49
USP9XQ93008 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP9XQ93008 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
USP9XQ93008 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP9XQ93008 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP9XQ93008 LINC01568-207ENST00000641790 1380 ntBASIC18.14■□□□□ 0.49
USP9XQ93008 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP9XQ93008 AC020928.2-201ENST00000588717 2197 ntBASIC18.14■□□□□ 0.49
USP9XQ93008 AP000593.1-201ENST00000393668 712 ntBASIC18.14■□□□□ 0.49
USP9XQ93008 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP9XQ93008 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.14■□□□□ 0.49
USP9XQ93008 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.14■□□□□ 0.49
USP9XQ93008 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.14■□□□□ 0.49
USP9XQ93008 C11orf96-202ENST00000528572 1834 ntBASIC18.14■□□□□ 0.49
USP9XQ93008 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.14■□□□□ 0.49
USP9XQ93008 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP9XQ93008 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP9XQ93008 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
USP9XQ93008 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.13■□□□□ 0.49
USP9XQ93008 REXO1L10P-201ENST00000615707 1290 ntBASIC18.13■□□□□ 0.49
USP9XQ93008 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP9XQ93008 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.13■□□□□ 0.49
USP9XQ93008 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP9XQ93008 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP9XQ93008 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
USP9XQ93008 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP9XQ93008 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
USP9XQ93008 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP9XQ93008 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms