Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 AC027612.3-201ENST00000413684 1047 ntBASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 AC105233.4-201ENST00000642045 216 ntBASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 AC010141.3-201ENST00000456659 717 ntBASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 MIR6084-201ENST00000622012 110 ntBASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 AC020907.5-201ENST00000624372 1936 ntBASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB40AQ8WXH6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 AC123595.1-201ENST00000440769 1046 ntBASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 AFG3L1P-217ENST00000557444 2447 ntBASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40AQ8WXH6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 AC027702.1-201ENST00000563810 1770 ntBASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40AQ8WXH6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 AL391422.3-201ENST00000603791 2761 ntBASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40AQ8WXH6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms