Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
STAG1Q8WVM7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 AC010980.2-201ENST00000587099 1412 ntBASIC24.35■■□□□ 1.49
STAG1Q8WVM7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 PLK5-205ENST00000642079 1969 ntBASIC24.35■■□□□ 1.49
STAG1Q8WVM7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.35■■□□□ 1.49
STAG1Q8WVM7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 AL138781.1-201ENST00000566567 1274 ntBASIC24.34■■□□□ 1.49
STAG1Q8WVM7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
STAG1Q8WVM7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
STAG1Q8WVM7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
STAG1Q8WVM7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
STAG1Q8WVM7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
STAG1Q8WVM7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.33■■□□□ 1.49
STAG1Q8WVM7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.33■■□□□ 1.49
STAG1Q8WVM7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
STAG1Q8WVM7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
STAG1Q8WVM7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.33■■□□□ 1.48
STAG1Q8WVM7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
STAG1Q8WVM7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
STAG1Q8WVM7 CYP21A1P-202ENST00000354927 1481 ntBASIC24.32■■□□□ 1.48
STAG1Q8WVM7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 MKRN4P-201ENST00000444706 1521 ntBASIC24.32■■□□□ 1.48
STAG1Q8WVM7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
STAG1Q8WVM7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 AL137060.1-201ENST00000618151 2648 ntBASIC24.31■■□□□ 1.48
STAG1Q8WVM7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.31■■□□□ 1.48
STAG1Q8WVM7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 AC027702.1-201ENST00000563810 1770 ntBASIC24.3■■□□□ 1.48
STAG1Q8WVM7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 MCRIP2P1-201ENST00000394346 511 ntBASIC24.3■■□□□ 1.48
STAG1Q8WVM7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
STAG1Q8WVM7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms