Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CCDC107Q8WV48 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC107Q8WV48 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC107Q8WV48 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC107Q8WV48 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC107Q8WV48 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CCDC107Q8WV48 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 PBX2P1-201ENST00000493219 1291 ntBASIC17.76■□□□□ 0.43
CCDC107Q8WV48 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC107Q8WV48 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 AC003102.1-202ENST00000563394 1796 ntBASIC17.75■□□□□ 0.43
CCDC107Q8WV48 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC107Q8WV48 AFG3L1P-217ENST00000557444 2447 ntBASIC17.74■□□□□ 0.43
CCDC107Q8WV48 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC107Q8WV48 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC107Q8WV48 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms