Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SH3RF3Q8TEJ3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SH3RF3Q8TEJ3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 AC105020.6-201ENST00000621523 1217 ntBASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 Z98882.1-201ENST00000622160 2253 ntBASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SH3RF3Q8TEJ3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.59■■□□□ 1.53
SH3RF3Q8TEJ3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 AC006058.3-201ENST00000606217 1069 ntBASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
SH3RF3Q8TEJ3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 AC060766.5-201ENST00000590539 871 ntBASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 HLA-B-256ENST00000639848 1089 ntBASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
SH3RF3Q8TEJ3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 AC087633.2-202ENST00000565166 1439 ntBASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 AC098590.1-201ENST00000468126 897 ntBASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 AC026366.1-201ENST00000488803 879 ntBASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SH3RF3Q8TEJ3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 AP003097.1-201ENST00000530657 1135 ntBASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 AC008403.3-201ENST00000598924 454 ntBASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SH3RF3Q8TEJ3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SH3RF3Q8TEJ3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.54■■□□□ 1.52
SH3RF3Q8TEJ3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SH3RF3Q8TEJ3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
SH3RF3Q8TEJ3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.54■■□□□ 1.52
SH3RF3Q8TEJ3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms