Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 AL589743.5-201ENST00000616611 1050 ntBASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF2Q8TEC5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 KRT18P68-201ENST00000392293 1000 ntBASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF2Q8TEC5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 PRORSD1P-201ENST00000295112 541 ntBASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SH3RF2Q8TEC5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 AC116050.2-201ENST00000612102 1779 ntBASIC21.41■■□□□ 1.02
SH3RF2Q8TEC5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 CYP21A1P-202ENST00000354927 1481 ntBASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF2Q8TEC5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.39■■□□□ 1.02
SH3RF2Q8TEC5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 UNC93B5-201ENST00000530315 699 ntBASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SH3RF2Q8TEC5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms