Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CFAP43Q8NDM7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC32.55■■■□□ 2.8
CFAP43Q8NDM7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
CFAP43Q8NDM7 POM121L13P-201ENST00000422362 380 ntBASIC32.55■■■□□ 2.8
CFAP43Q8NDM7 AL445228.2-201ENST00000605589 952 ntBASIC32.55■■■□□ 2.8
CFAP43Q8NDM7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CFAP43Q8NDM7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CFAP43Q8NDM7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CFAP43Q8NDM7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CFAP43Q8NDM7 RPS2P55-201ENST00000397318 883 ntBASIC32.54■■■□□ 2.8
CFAP43Q8NDM7 AC107956.1-201ENST00000494359 873 ntBASIC32.54■■■□□ 2.8
CFAP43Q8NDM7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC32.54■■■□□ 2.8
CFAP43Q8NDM7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CFAP43Q8NDM7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC32.54■■■□□ 2.8
CFAP43Q8NDM7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC32.54■■■□□ 2.8
CFAP43Q8NDM7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CFAP43Q8NDM7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC32.53■■■□□ 2.8
CFAP43Q8NDM7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
CFAP43Q8NDM7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CFAP43Q8NDM7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC32.52■■■□□ 2.8
CFAP43Q8NDM7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC32.52■■■□□ 2.8
CFAP43Q8NDM7 GOLGA2P6-201ENST00000340929 2049 ntBASIC32.52■■■□□ 2.8
CFAP43Q8NDM7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CFAP43Q8NDM7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
CFAP43Q8NDM7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CFAP43Q8NDM7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CFAP43Q8NDM7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CFAP43Q8NDM7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC32.51■■■□□ 2.8
CFAP43Q8NDM7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
CFAP43Q8NDM7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC32.51■■■□□ 2.8
CFAP43Q8NDM7 AC007322.3-201ENST00000426526 701 ntBASIC32.51■■■□□ 2.79
CFAP43Q8NDM7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC32.51■■■□□ 2.79
CFAP43Q8NDM7 TK2-213ENST00000563369 882 ntTSL 5 BASIC32.51■■■□□ 2.79
CFAP43Q8NDM7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC32.51■■■□□ 2.79
CFAP43Q8NDM7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
CFAP43Q8NDM7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CFAP43Q8NDM7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 OR2A1-AS1-207ENST00000486094 819 ntBASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 AL355075.4-201ENST00000554988 638 ntBASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 AC097493.4-201ENST00000641197 219 ntBASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
CFAP43Q8NDM7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CFAP43Q8NDM7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
CFAP43Q8NDM7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CFAP43Q8NDM7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC32.49■■■□□ 2.79
CFAP43Q8NDM7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC32.48■■■□□ 2.79
CFAP43Q8NDM7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC32.48■■■□□ 2.79
CFAP43Q8NDM7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CFAP43Q8NDM7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CFAP43Q8NDM7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CFAP43Q8NDM7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CFAP43Q8NDM7 AL049637.2-201ENST00000641778 930 ntBASIC32.48■■■□□ 2.79
CFAP43Q8NDM7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CFAP43Q8NDM7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC32.48■■■□□ 2.79
CFAP43Q8NDM7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
CFAP43Q8NDM7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CFAP43Q8NDM7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms