Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPSF7Q8N684 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPSF7Q8N684 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.12■□□□□ 0.81
CPSF7Q8N684 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
CPSF7Q8N684 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.11■□□□□ 0.81
CPSF7Q8N684 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CPSF7Q8N684 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.11■□□□□ 0.81
CPSF7Q8N684 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.11■□□□□ 0.81
CPSF7Q8N684 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.11■□□□□ 0.81
CPSF7Q8N684 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.11■□□□□ 0.81
CPSF7Q8N684 AC027612.3-201ENST00000413684 1047 ntBASIC20.11■□□□□ 0.81
CPSF7Q8N684 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.11■□□□□ 0.81
CPSF7Q8N684 AC034268.1-201ENST00000441047 882 ntBASIC20.11■□□□□ 0.81
CPSF7Q8N684 AL354811.1-201ENST00000610286 706 ntBASIC20.11■□□□□ 0.81
CPSF7Q8N684 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.11■□□□□ 0.81
CPSF7Q8N684 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF7Q8N684 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CPSF7Q8N684 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF7Q8N684 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.1■□□□□ 0.81
CPSF7Q8N684 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CPSF7Q8N684 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF7Q8N684 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CPSF7Q8N684 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CPSF7Q8N684 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF7Q8N684 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CPSF7Q8N684 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CPSF7Q8N684 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.09■□□□□ 0.81
CPSF7Q8N684 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.09■□□□□ 0.81
CPSF7Q8N684 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF7Q8N684 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF7Q8N684 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.09■□□□□ 0.81
CPSF7Q8N684 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.09■□□□□ 0.81
CPSF7Q8N684 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF7Q8N684 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF7Q8N684 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.09■□□□□ 0.81
CPSF7Q8N684 AL512408.1-201ENST00000569378 2000 ntBASIC20.09■□□□□ 0.81
CPSF7Q8N684 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF7Q8N684 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF7Q8N684 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF7Q8N684 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.08■□□□□ 0.81
CPSF7Q8N684 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF7Q8N684 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CPSF7Q8N684 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.08■□□□□ 0.81
CPSF7Q8N684 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.08■□□□□ 0.81
CPSF7Q8N684 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF7Q8N684 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF7Q8N684 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF7Q8N684 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF7Q8N684 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF7Q8N684 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF7Q8N684 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.07■□□□□ 0.8
CPSF7Q8N684 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.07■□□□□ 0.8
CPSF7Q8N684 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.07■□□□□ 0.8
CPSF7Q8N684 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms