Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.43■□□□□ 0.86
TRAM1L1Q8N609 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 ID1-201ENST00000376105 1233 ntBASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 AC010980.2-201ENST00000587099 1412 ntBASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAM1L1Q8N609 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 TSPY6P-201ENST00000448518 926 ntBASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 AL109923.1-201ENST00000618799 583 ntBASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 MKRN4P-201ENST00000444706 1521 ntBASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAM1L1Q8N609 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 GUSBP6-202ENST00000438529 1198 ntBASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 AC104771.1-201ENST00000603335 964 ntBASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAM1L1Q8N609 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAM1L1Q8N609 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAM1L1Q8N609 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAM1L1Q8N609 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRAM1L1Q8N609 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TRAM1L1Q8N609 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAM1L1Q8N609 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 CYP21A1P-202ENST00000354927 1481 ntBASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 MCRIP2P1-201ENST00000394346 511 ntBASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 SLC29A4P1-201ENST00000398760 971 ntBASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 HLA-L-209ENST00000420110 1011 ntBASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 PLK5-205ENST00000642079 1969 ntBASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
TRAM1L1Q8N609 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAM1L1Q8N609 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRAM1L1Q8N609 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.38■□□□□ 0.85
TRAM1L1Q8N609 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
TRAM1L1Q8N609 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAM1L1Q8N609 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAM1L1Q8N609 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAM1L1Q8N609 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRAM1L1Q8N609 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms