Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
LTBP4Q8N2S1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
LTBP4Q8N2S1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC29.19■■■□□ 2.26
LTBP4Q8N2S1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC29.19■■■□□ 2.26
LTBP4Q8N2S1 AC007322.3-201ENST00000426526 701 ntBASIC29.19■■■□□ 2.26
LTBP4Q8N2S1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC29.19■■■□□ 2.26
LTBP4Q8N2S1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
LTBP4Q8N2S1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC29.19■■■□□ 2.26
LTBP4Q8N2S1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC29.19■■■□□ 2.26
LTBP4Q8N2S1 AC022211.4-201ENST00000625094 2161 ntBASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 PVRIG2P-201ENST00000435460 978 ntBASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC29.18■■■□□ 2.26
LTBP4Q8N2S1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
LTBP4Q8N2S1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 FAM8A6P-201ENST00000407496 1135 ntBASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 AK4P3-201ENST00000418260 669 ntBASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
LTBP4Q8N2S1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 RER1-204ENST00000378518 522 ntTSL 3 BASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 AC116562.2-201ENST00000507042 360 ntBASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 AC023511.2-201ENST00000618803 211 ntBASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 AL139125.2-201ENST00000623134 1869 ntBASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
LTBP4Q8N2S1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
LTBP4Q8N2S1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC29.14■■■□□ 2.26
LTBP4Q8N2S1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
LTBP4Q8N2S1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC29.14■■■□□ 2.26
LTBP4Q8N2S1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
LTBP4Q8N2S1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
LTBP4Q8N2S1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC29.14■■■□□ 2.25
LTBP4Q8N2S1 COPE-203ENST00000351079 907 ntTSL 2 BASIC29.13■■■□□ 2.25
LTBP4Q8N2S1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
LTBP4Q8N2S1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC29.13■■■□□ 2.25
LTBP4Q8N2S1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC29.13■■■□□ 2.25
LTBP4Q8N2S1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.13■■■□□ 2.25
LTBP4Q8N2S1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
LTBP4Q8N2S1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
LTBP4Q8N2S1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
LTBP4Q8N2S1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 SAPCD2P2-201ENST00000431719 1174 ntBASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 CLEC4GP1-201ENST00000596555 870 ntBASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 AP000347.1-202ENST00000435868 847 ntBASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.12■■■□□ 2.25
LTBP4Q8N2S1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC29.11■■■□□ 2.25
LTBP4Q8N2S1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
LTBP4Q8N2S1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
LTBP4Q8N2S1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC29.11■■■□□ 2.25
LTBP4Q8N2S1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
LTBP4Q8N2S1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC29.11■■■□□ 2.25
LTBP4Q8N2S1 LINC01238-205ENST00000567549 1107 ntBASIC29.11■■■□□ 2.25
LTBP4Q8N2S1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC29.11■■■□□ 2.25
LTBP4Q8N2S1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC29.11■■■□□ 2.25
LTBP4Q8N2S1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
LTBP4Q8N2S1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms