Protein–RNA interactions for Protein: Q8N0V4

LGI2, Leucine-rich repeat LGI family member 2, humanhuman

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI2Q8N0V4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LGI2Q8N0V4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.28■■□□□ 1
LGI2Q8N0V4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.28■■□□□ 1
LGI2Q8N0V4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.28■■□□□ 1
LGI2Q8N0V4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LGI2Q8N0V4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LGI2Q8N0V4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LGI2Q8N0V4 AF106564.1-201ENST00000607058 2553 ntBASIC21.28■■□□□ 1
LGI2Q8N0V4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.28■■□□□ 1
LGI2Q8N0V4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LGI2Q8N0V4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LGI2Q8N0V4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LGI2Q8N0V4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.27■■□□□ 1
LGI2Q8N0V4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.27■■□□□ 1
LGI2Q8N0V4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LGI2Q8N0V4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.27■■□□□ 1
LGI2Q8N0V4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LGI2Q8N0V4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.27■■□□□ 1
LGI2Q8N0V4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.27■■□□□ 1
LGI2Q8N0V4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.27■■□□□ 1
LGI2Q8N0V4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.27■■□□□ 1
LGI2Q8N0V4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.27■■□□□ 1
LGI2Q8N0V4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.27■■□□□ 1
LGI2Q8N0V4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LGI2Q8N0V4 AC026310.3-201ENST00000625186 2373 ntBASIC21.27■■□□□ 1
LGI2Q8N0V4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.27■■□□□ 1
LGI2Q8N0V4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LGI2Q8N0V4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LGI2Q8N0V4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LGI2Q8N0V4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LGI2Q8N0V4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
LGI2Q8N0V4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LGI2Q8N0V4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
LGI2Q8N0V4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LGI2Q8N0V4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 MIPEPP3-201ENST00000412105 444 ntBASIC21.26■□□□□ 0.99
LGI2Q8N0V4 BX276092.2-201ENST00000417668 665 ntBASIC21.26■□□□□ 0.99
LGI2Q8N0V4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 AC142086.2-201ENST00000569753 217 ntBASIC21.26■□□□□ 0.99
LGI2Q8N0V4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LGI2Q8N0V4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 AL355472.2-201ENST00000422958 438 ntBASIC21.25■□□□□ 0.99
LGI2Q8N0V4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LGI2Q8N0V4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 AC098934.4-201ENST00000564127 592 ntBASIC21.24■□□□□ 0.99
LGI2Q8N0V4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.24■□□□□ 0.99
LGI2Q8N0V4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LGI2Q8N0V4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms