Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 POM121L13P-201ENST00000422362 380 ntBASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEFF1Q8IYR6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 AC105020.6-201ENST00000621523 1217 ntBASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEFF1Q8IYR6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEFF1Q8IYR6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.52■□□□□ 0.88
TMEFF1Q8IYR6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TMEFF1Q8IYR6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
TMEFF1Q8IYR6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
TMEFF1Q8IYR6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.52■□□□□ 0.87
TMEFF1Q8IYR6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 FAM99A-202ENST00000538190 1989 ntBASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEFF1Q8IYR6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 MIR1224-201ENST00000408193 85 ntBASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms