Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 AC011484.1-201ENST00000377652 1995 ntBASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 AC026271.2-201ENST00000428091 497 ntBASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 RARRES2P6-201ENST00000567333 442 ntBASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE9Q8IYJ1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 UBE2DNL-204ENST00000602536 740 ntBASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE9Q8IYJ1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
CPNE9Q8IYJ1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 KRT18P5-201ENST00000436075 1291 ntBASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.33■□□□□ 0.85
CPNE9Q8IYJ1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CPNE9Q8IYJ1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CPNE9Q8IYJ1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms