Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMC5Q8IY18 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMC5Q8IY18 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SMC5Q8IY18 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SMC5Q8IY18 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.6■■□□□ 1.69
SMC5Q8IY18 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.6■■□□□ 1.69
SMC5Q8IY18 AC243732.1-201ENST00000612648 864 ntBASIC25.6■■□□□ 1.69
SMC5Q8IY18 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.6■■□□□ 1.69
SMC5Q8IY18 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.6■■□□□ 1.69
SMC5Q8IY18 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.6■■□□□ 1.69
SMC5Q8IY18 RBM17P2-201ENST00000616397 1405 ntBASIC25.6■■□□□ 1.69
SMC5Q8IY18 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SMC5Q8IY18 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.6■■□□□ 1.69
SMC5Q8IY18 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SMC5Q8IY18 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMC5Q8IY18 AL512408.1-201ENST00000569378 2000 ntBASIC25.59■■□□□ 1.69
SMC5Q8IY18 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
SMC5Q8IY18 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMC5Q8IY18 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMC5Q8IY18 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMC5Q8IY18 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMC5Q8IY18 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.59■■□□□ 1.69
SMC5Q8IY18 AC091799.1-201ENST00000422823 811 ntBASIC25.59■■□□□ 1.69
SMC5Q8IY18 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.59■■□□□ 1.69
SMC5Q8IY18 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMC5Q8IY18 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMC5Q8IY18 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
SMC5Q8IY18 AC116050.2-201ENST00000612102 1779 ntBASIC25.59■■□□□ 1.69
SMC5Q8IY18 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC25.59■■□□□ 1.69
SMC5Q8IY18 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMC5Q8IY18 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.58■■□□□ 1.69
SMC5Q8IY18 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.58■■□□□ 1.69
SMC5Q8IY18 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMC5Q8IY18 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.58■■□□□ 1.69
SMC5Q8IY18 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.58■■□□□ 1.69
SMC5Q8IY18 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SMC5Q8IY18 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMC5Q8IY18 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SMC5Q8IY18 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SMC5Q8IY18 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
SMC5Q8IY18 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
SMC5Q8IY18 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMC5Q8IY18 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMC5Q8IY18 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMC5Q8IY18 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.57■■□□□ 1.68
SMC5Q8IY18 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.57■■□□□ 1.68
SMC5Q8IY18 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.57■■□□□ 1.68
SMC5Q8IY18 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMC5Q8IY18 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMC5Q8IY18 AC019069.1-201ENST00000610008 1333 ntBASIC25.57■■□□□ 1.68
SMC5Q8IY18 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMC5Q8IY18 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMC5Q8IY18 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMC5Q8IY18 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC25.56■■□□□ 1.68
SMC5Q8IY18 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.56■■□□□ 1.68
SMC5Q8IY18 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
SMC5Q8IY18 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMC5Q8IY18 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMC5Q8IY18 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMC5Q8IY18 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMC5Q8IY18 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.55■■□□□ 1.68
SMC5Q8IY18 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.55■■□□□ 1.68
SMC5Q8IY18 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMC5Q8IY18 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.55■■□□□ 1.68
SMC5Q8IY18 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SMC5Q8IY18 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SMC5Q8IY18 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.55■■□□□ 1.68
SMC5Q8IY18 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.55■■□□□ 1.68
SMC5Q8IY18 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.55■■□□□ 1.68
SMC5Q8IY18 MIR2861-201ENST00000636310 90 ntBASIC25.55■■□□□ 1.68
SMC5Q8IY18 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMC5Q8IY18 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
SMC5Q8IY18 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMC5Q8IY18 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC25.55■■□□□ 1.68
SMC5Q8IY18 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMC5Q8IY18 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMC5Q8IY18 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMC5Q8IY18 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMC5Q8IY18 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SMC5Q8IY18 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SMC5Q8IY18 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMC5Q8IY18 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMC5Q8IY18 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SMC5Q8IY18 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMC5Q8IY18 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.54■■□□□ 1.68
SMC5Q8IY18 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SMC5Q8IY18 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMC5Q8IY18 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC25.54■■□□□ 1.68
SMC5Q8IY18 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.54■■□□□ 1.68
SMC5Q8IY18 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SMC5Q8IY18 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMC5Q8IY18 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.53■■□□□ 1.68
SMC5Q8IY18 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMC5Q8IY18 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.53■■□□□ 1.68
SMC5Q8IY18 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMC5Q8IY18 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.53■■□□□ 1.68
SMC5Q8IY18 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.53■■□□□ 1.68
SMC5Q8IY18 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMC5Q8IY18 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMC5Q8IY18 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms