Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 MKRN4P-201ENST00000444706 1521 ntBASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 AL137060.1-201ENST00000618151 2648 ntBASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 AC010980.2-201ENST00000587099 1412 ntBASIC19.08■□□□□ 0.64
C9orf40Q8IXQ3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
C9orf40Q8IXQ3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 PLK5-205ENST00000642079 1969 ntBASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C9orf40Q8IXQ3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 SLC29A4P1-201ENST00000398760 971 ntBASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 AC100791.3-201ENST00000617619 330 ntBASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.05■□□□□ 0.64
C9orf40Q8IXQ3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 CYP21A1P-202ENST00000354927 1481 ntBASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C9orf40Q8IXQ3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 AL355472.2-201ENST00000422958 438 ntBASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms