Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF546Q86UE3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 MIR4508-201ENST00000584178 70 ntBASIC17.12■□□□□ 0.33
ZNF546Q86UE3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF546Q86UE3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 AC004987.1-201ENST00000428627 508 ntBASIC17.11■□□□□ 0.33
ZNF546Q86UE3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF546Q86UE3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF546Q86UE3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 MIR6722-201ENST00000617286 78 ntBASIC17.09■□□□□ 0.33
ZNF546Q86UE3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF546Q86UE3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF546Q86UE3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF546Q86UE3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ZNF546Q86UE3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF546Q86UE3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
ZNF546Q86UE3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.08■□□□□ 0.33
ZNF546Q86UE3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF546Q86UE3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
ZNF546Q86UE3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF546Q86UE3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
ZNF546Q86UE3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF546Q86UE3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF546Q86UE3 AC120498.9-201ENST00000339021 3867 ntBASIC17.08■□□□□ 0.32
ZNF546Q86UE3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF546Q86UE3 TSPY13P-201ENST00000338964 914 ntBASIC17.08■□□□□ 0.32
ZNF546Q86UE3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.08■□□□□ 0.32
ZNF546Q86UE3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNF546Q86UE3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms