Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 MMP23A-201ENST00000234610 1017 ntBASIC17.56■□□□□ 0.4
CSMD2Q7Z408 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 AC105020.6-201ENST00000621523 1217 ntBASIC17.56■□□□□ 0.4
CSMD2Q7Z408 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.56■□□□□ 0.4
CSMD2Q7Z408 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 CRYGFP-201ENST00000418459 633 ntBASIC17.55■□□□□ 0.4
CSMD2Q7Z408 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 AC079089.2-201ENST00000531211 1277 ntBASIC17.55■□□□□ 0.4
CSMD2Q7Z408 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 TPM4P1-201ENST00000436100 807 ntBASIC17.55■□□□□ 0.4
CSMD2Q7Z408 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD2Q7Z408 AC005363.2-201ENST00000618631 242 ntBASIC17.55■□□□□ 0.4
CSMD2Q7Z408 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 AC091799.1-201ENST00000422823 811 ntBASIC17.54■□□□□ 0.4
CSMD2Q7Z408 DUX4L26-201ENST00000489078 1255 ntBASIC17.54■□□□□ 0.4
CSMD2Q7Z408 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 AF186192.3-201ENST00000583427 947 ntBASIC17.54■□□□□ 0.4
CSMD2Q7Z408 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.54■□□□□ 0.4
CSMD2Q7Z408 C9orf163-202ENST00000624034 2573 ntBASIC17.54■□□□□ 0.4
CSMD2Q7Z408 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 AC087388.1-201ENST00000571370 1112 ntBASIC17.53■□□□□ 0.4
CSMD2Q7Z408 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD2Q7Z408 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms