Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SCXQ7RTU7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCXQ7RTU7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCXQ7RTU7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCXQ7RTU7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCXQ7RTU7 GPX1P1-201ENST00000388829 606 ntBASIC13.55□□□□□ -0.24
SCXQ7RTU7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCXQ7RTU7 AC231657.2-201ENST00000624556 255 ntBASIC13.55□□□□□ -0.24
SCXQ7RTU7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SCXQ7RTU7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SCXQ7RTU7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.55□□□□□ -0.24
SCXQ7RTU7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SCXQ7RTU7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SCXQ7RTU7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SCXQ7RTU7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SCXQ7RTU7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SCXQ7RTU7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
SCXQ7RTU7 AC007322.1-201ENST00000426983 750 ntBASIC13.53□□□□□ -0.24
SCXQ7RTU7 AC010141.2-201ENST00000452426 721 ntBASIC13.53□□□□□ -0.24
SCXQ7RTU7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.53□□□□□ -0.24
SCXQ7RTU7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 DUX4L16-201ENST00000555130 1264 ntBASIC13.53□□□□□ -0.24
SCXQ7RTU7 AC005181.1-201ENST00000604782 1256 ntBASIC13.53□□□□□ -0.24
SCXQ7RTU7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SCXQ7RTU7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SCXQ7RTU7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SCXQ7RTU7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SCXQ7RTU7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SCXQ7RTU7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SCXQ7RTU7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.52□□□□□ -0.24
SCXQ7RTU7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
SCXQ7RTU7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
SCXQ7RTU7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SCXQ7RTU7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.52□□□□□ -0.25
SCXQ7RTU7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.52□□□□□ -0.25
SCXQ7RTU7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SCXQ7RTU7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SCXQ7RTU7 AC138907.5-202ENST00000569484 235 ntBASIC13.52□□□□□ -0.25
SCXQ7RTU7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SCXQ7RTU7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
SCXQ7RTU7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.52□□□□□ -0.25
SCXQ7RTU7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SCXQ7RTU7 AL121832.2-201ENST00000610979 668 ntBASIC13.52□□□□□ -0.25
SCXQ7RTU7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.52□□□□□ -0.25
SCXQ7RTU7 AL050303.2-201ENST00000619798 666 ntBASIC13.52□□□□□ -0.25
SCXQ7RTU7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.52□□□□□ -0.25
SCXQ7RTU7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SCXQ7RTU7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SCXQ7RTU7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SCXQ7RTU7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SCXQ7RTU7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC13.52□□□□□ -0.25
SCXQ7RTU7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SCXQ7RTU7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms