Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CD109Q6YHK3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC31.78■■■□□ 2.68
CD109Q6YHK3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC31.78■■■□□ 2.68
CD109Q6YHK3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC31.78■■■□□ 2.68
CD109Q6YHK3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC31.78■■■□□ 2.68
CD109Q6YHK3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC31.78■■■□□ 2.68
CD109Q6YHK3 NFE2L3P1-201ENST00000588207 1959 ntBASIC31.78■■■□□ 2.68
CD109Q6YHK3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CD109Q6YHK3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CD109Q6YHK3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CD109Q6YHK3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CD109Q6YHK3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC31.77■■■□□ 2.68
CD109Q6YHK3 KRT18P57-201ENST00000443599 1254 ntBASIC31.77■■■□□ 2.68
CD109Q6YHK3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC31.77■■■□□ 2.68
CD109Q6YHK3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CD109Q6YHK3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC31.77■■■□□ 2.68
CD109Q6YHK3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CD109Q6YHK3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC31.77■■■□□ 2.68
CD109Q6YHK3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
CD109Q6YHK3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC31.76■■■□□ 2.68
CD109Q6YHK3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.68
CD109Q6YHK3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
CD109Q6YHK3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC31.76■■■□□ 2.67
CD109Q6YHK3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CD109Q6YHK3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
CD109Q6YHK3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CD109Q6YHK3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
CD109Q6YHK3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CD109Q6YHK3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC31.75■■■□□ 2.67
CD109Q6YHK3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC31.75■■■□□ 2.67
CD109Q6YHK3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC31.75■■■□□ 2.67
CD109Q6YHK3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CD109Q6YHK3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CD109Q6YHK3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC31.75■■■□□ 2.67
CD109Q6YHK3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CD109Q6YHK3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CD109Q6YHK3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CD109Q6YHK3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC31.75■■■□□ 2.67
CD109Q6YHK3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC31.75■■■□□ 2.67
CD109Q6YHK3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CD109Q6YHK3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC31.75■■■□□ 2.67
CD109Q6YHK3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC31.74■■■□□ 2.67
CD109Q6YHK3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CD109Q6YHK3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CD109Q6YHK3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC31.74■■■□□ 2.67
CD109Q6YHK3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC31.74■■■□□ 2.67
CD109Q6YHK3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC31.74■■■□□ 2.67
CD109Q6YHK3 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.74■■■□□ 2.67
CD109Q6YHK3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC31.74■■■□□ 2.67
CD109Q6YHK3 RBM17P1-201ENST00000453646 1190 ntBASIC31.74■■■□□ 2.67
CD109Q6YHK3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC31.74■■■□□ 2.67
CD109Q6YHK3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CD109Q6YHK3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC31.74■■■□□ 2.67
CD109Q6YHK3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
CD109Q6YHK3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CD109Q6YHK3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CD109Q6YHK3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CD109Q6YHK3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC31.73■■■□□ 2.67
CD109Q6YHK3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CD109Q6YHK3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CD109Q6YHK3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CD109Q6YHK3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CD109Q6YHK3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
CD109Q6YHK3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
CD109Q6YHK3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CD109Q6YHK3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CD109Q6YHK3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC31.72■■■□□ 2.67
CD109Q6YHK3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC31.72■■■□□ 2.67
CD109Q6YHK3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CD109Q6YHK3 AC079598.2-202ENST00000546624 1451 ntBASIC31.72■■■□□ 2.67
CD109Q6YHK3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC31.72■■■□□ 2.67
CD109Q6YHK3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC31.72■■■□□ 2.67
CD109Q6YHK3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CD109Q6YHK3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CD109Q6YHK3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.72■■■□□ 2.67
CD109Q6YHK3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CD109Q6YHK3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CD109Q6YHK3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
CD109Q6YHK3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC31.71■■■□□ 2.67
CD109Q6YHK3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CD109Q6YHK3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC31.71■■■□□ 2.67
CD109Q6YHK3 TERF1P1-201ENST00000311003 1181 ntBASIC31.71■■■□□ 2.67
CD109Q6YHK3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CD109Q6YHK3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
CD109Q6YHK3 DUT-205ENST00000558813 769 ntTSL 2 BASIC31.71■■■□□ 2.67
CD109Q6YHK3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
CD109Q6YHK3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
CD109Q6YHK3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC31.7■■■□□ 2.67
CD109Q6YHK3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC31.7■■■□□ 2.67
CD109Q6YHK3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CD109Q6YHK3 AC073508.3-201ENST00000619697 1419 ntBASIC31.7■■■□□ 2.67
CD109Q6YHK3 HTR7P1-201ENST00000538670 1336 ntBASIC31.7■■■□□ 2.67
CD109Q6YHK3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC31.7■■■□□ 2.67
CD109Q6YHK3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC31.7■■■□□ 2.67
CD109Q6YHK3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC31.7■■■□□ 2.67
CD109Q6YHK3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC31.7■■■□□ 2.67
CD109Q6YHK3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CD109Q6YHK3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.69■■■□□ 2.66
CD109Q6YHK3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC31.69■■■□□ 2.66
CD109Q6YHK3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms