Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AF201337.1-201ENST00000520239 748 ntBASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 AL591742.1-201ENST00000604433 565 ntBASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.49■■□□□ 1.03
RFWD3Q6PCD5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 AL355802.2-201ENST00000402069 882 ntBASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 AC091799.1-201ENST00000422823 811 ntBASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 GUSBP6-202ENST00000438529 1198 ntBASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 TSPY6P-201ENST00000448518 926 ntBASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 AC133552.2-202ENST00000575694 574 ntBASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 AC016405.3-201ENST00000607710 860 ntBASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.48■■□□□ 1.03
RFWD3Q6PCD5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 Z98882.1-201ENST00000622160 2253 ntBASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD3Q6PCD5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 AC093787.1-201ENST00000450396 207 ntBASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD3Q6PCD5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RFWD3Q6PCD5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD3Q6PCD5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 AC069236.1-201ENST00000604339 616 ntBASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 AC008694.1-202ENST00000636953 945 ntBASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD3Q6PCD5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms