Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 FAM99A-202ENST00000538190 1989 ntBASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LYSMD4Q5XG99 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 KRT18P21-201ENST00000515767 1272 ntBASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 AL049637.2-201ENST00000641778 930 ntBASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 AC127496.7-201ENST00000625110 1798 ntBASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 AC087633.2-202ENST00000565166 1439 ntBASIC20.36■□□□□ 0.85
LYSMD4Q5XG99 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 MIR4785-201ENST00000585005 73 ntBASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 AC120498.8-201ENST00000614275 531 ntBASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD4Q5XG99 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 PGM5P4-201ENST00000421970 445 ntBASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 AC110285.5-201ENST00000611501 352 ntBASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
LYSMD4Q5XG99 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD4Q5XG99 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD4Q5XG99 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD4Q5XG99 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.33■□□□□ 0.85
LYSMD4Q5XG99 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD4Q5XG99 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
LYSMD4Q5XG99 KRASP1-201ENST00000407852 552 ntBASIC20.33■□□□□ 0.85
LYSMD4Q5XG99 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD4Q5XG99 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.33■□□□□ 0.85
LYSMD4Q5XG99 AC005829.2-201ENST00000571422 1056 ntBASIC20.33■□□□□ 0.85
LYSMD4Q5XG99 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LYSMD4Q5XG99 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
LYSMD4Q5XG99 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LYSMD4Q5XG99 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms